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Sec63 SEC63 homolog, protein translocation regulator [ Mus pahari (shrew mouse) ]

Gene ID: 110326386, updated on 15-Mar-2024

Summary

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Gene symbol
Sec63
Gene description
SEC63 homolog, protein translocation regulator
See related
Ensembl:MGP_PahariEiJ_G0030700
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Sec63 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
21
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 9 NC_034598.1 (8974391..9042147)

Chromosome 9 - NC_034598.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 2 group E member 1 Neighboring gene osteoclastogenesis associated transmembrane protein 1 Neighboring gene Scm polycomb group protein like 4 Neighboring gene sine oculis binding protein homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034598.1 Chromosome 9 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec62/Sec63 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translocation protein SEC63 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034598.1 Reference PAHARI_EIJ_v1.1

    Range
    8974391..9042147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021204785.2 → XP_021060444.1  translocation protein SEC63 homolog isoform X1

    Related
    MGP_PahariEiJ_P0085964, MGP_PahariEiJ_T0085964.1
    Conserved Domains (4) summary
    smart00611
    Location:209 → 715
    SEC63; Domain of unknown function in Sec63p, Brr2p and other proteins
    TIGR00927
    Location:450 → 615
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam00226
    Location:104 → 162
    DnaJ; DnaJ domain
    pfam14797
    Location:574 → 612
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex

  2. XM_029542138.1 → XP_029397998.1  translocation protein SEC63 homolog isoform X2

    Related
    MGP_PahariEiJ_T0085965.1
    Conserved Domains (4) summary
    smart00611
    Location:209 → 714
    SEC63; Domain of unknown function in Sec63p, Brr2p and other proteins
    TIGR00927
    Location:450 → 660
    2A1904; K+-dependent Na+/Ca+ exchanger
    pfam00226
    Location:104 → 162
    DnaJ; DnaJ domain
    pfam14797
    Location:573 → 611
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
Nucleotide Protein
Heading Accession and Version

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