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Ubqln4 ubiquilin 4 [ Mus pahari (shrew mouse) ]

Gene ID: 110319891, updated on 15-Mar-2024

Summary

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Gene symbol
Ubqln4
Gene description
ubiquilin 4
See related
Ensembl:MGP_PahariEiJ_G0026618
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Ubqln4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 4 NC_034593.1 (79063694..79081586)

Chromosome 4 - NC_034593.1Genomic Context describing neighboring genes Neighboring gene RAB25, member RAS oncogene family Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 Neighboring gene signal sequence receptor subunit 2 Neighboring gene uncharacterized LOC115063808

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034593.1 Chromosome 4 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034593.1 Reference PAHARI_EIJ_v1.1

    Range
    79063694..79081586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029537557.1 → XP_029393417.1  ubiquilin-4

    Related
    MGP_PahariEiJ_P0069409, MGP_PahariEiJ_T0069409.1
    Conserved Domains (3) summary
    cd14399
    Location:552 → 591
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    TIGR00601
    Location:13 → 258
    rad23; UV excision repair protein Rad23
    cd01808
    Location:11 → 83
    Ubl_PLICs; ubiquitin-like (Ubl) domain found in eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
Nucleotide Protein
Heading Accession and Version

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