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Ubqln2 ubiquilin 2 [ Mus pahari (shrew mouse) ]

Gene ID: 110313615, updated on 15-Mar-2024

Summary

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Gene symbol
Ubqln2
Gene description
ubiquilin 2
See related
Ensembl:MGP_PahariEiJ_G0032050
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) X NC_034613.1 (132191794..132195175)

Chromosome X - NC_034613.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-60S ribosomal protein L40-like Neighboring gene Ras related GTP binding B Neighboring gene KLF transcription factor 8 Neighboring gene serine/threonine-protein kinase tousled-like 2 pseudogene Neighboring gene 60S ribosomal protein L7 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034613.1 Chromosome X Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034613.1 Reference PAHARI_EIJ_v1.1

    Range
    132191794..132195175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029534390.1 → XP_029390250.1  ubiquilin-2

    Related
    MGP_PahariEiJ_P0090736, MGP_PahariEiJ_T0090736.1
    Conserved Domains (5) summary
    smart00727
    Location:396 → 440
    STI1; Heat shock chaperonin-binding motif
    cd14399
    Location:595 → 634
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    cd01808
    Location:31 → 103
    Ubl_PLICs; ubiquitin-like (Ubl) domain found in eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    pfam13779
    Location:383 → 476
    DUF4175; Domain of unknown function (DUF4175)
    cl17974
    Location:219 → 263
    STI1; STI1 domain
Nucleotide Protein
Heading Accession and Version

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