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A4galt alpha 1,4-galactosyltransferase (P1PK blood group) [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110310458, updated on 15-Mar-2024

Summary

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Gene symbol
A4galt
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
See related
Ensembl:MGP_CAROLIEiJ_G0020095
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See A4galt in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 15 NC_034584.1 (77217044..77244240, complement)

Chromosome 15 - NC_034584.1Genomic Context describing neighboring genes Neighboring gene U12 minor spliceosomal RNA Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene ADP ribosylation factor GTPase activating protein 3 Neighboring gene uncharacterized LOC110310985

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034584.1 Chromosome 15 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034584.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    77217044..77244240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021183446.2 → XP_021039105.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Related
    MGP_CAROLIEiJ_P0039246, MGP_CAROLIEiJ_T0039246.1
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  2. XM_021183445.2 → XP_021039104.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Related
    MGP_CAROLIEiJ_P0039245, MGP_CAROLIEiJ_T0039245.1
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  3. XM_021183442.2 → XP_021039101.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  4. XM_021183444.2 → XP_021039103.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  5. XM_029469838.1 → XP_029325698.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  6. XM_029469839.1 → XP_029325699.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  7. XM_029469840.1 → XP_029325700.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P7QLQ3
    Conserved Domains (2) summary
    pfam04488
    Location:94 → 217
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:230 → 352
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
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