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LOC110309938 olfactory receptor 6S1 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110309938, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110309938
Gene description
olfactory receptor 6S1
See related
Ensembl:MGP_CAROLIEiJ_G0019216
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See LOC110309938 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 14 NC_034583.1 (43008113..43009232, complement)

Chromosome 14 - NC_034583.1Genomic Context describing neighboring genes Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene transfer RNA leucine (anticodon UAG) Neighboring gene transfer RNA threonine (anticodon UGU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034583.1 Chromosome 14 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
olfactory receptor 6S1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034583.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    43008113..43009232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021182688.1 → XP_021038347.1  olfactory receptor 6S1

    UniProtKB/TrEMBL
    A0A6P5R7L6
    Related
    MGP_CAROLIEiJ_P0036500, MGP_CAROLIEiJ_T0036500.1
    Conserved Domains (1) summary
    cd15912
    Location:29 → 297
    7tmA_OR6C-like; olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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