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Gcnt4 glucosaminyl (N-acetyl) transferase 4 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110308042, updated on 15-Mar-2024

Summary

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Gene symbol
Gcnt4
Gene description
glucosaminyl (N-acetyl) transferase 4
See related
Ensembl:MGP_CAROLIEiJ_G0018810
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Gcnt4 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 13 NC_034582.1 (90554880..90580637)

Chromosome 13 - NC_034582.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase Neighboring gene ankyrin repeat domain 31 Neighboring gene transcription factor BTF3 pseudogene Neighboring gene uncharacterized LOC110308225

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034582.1 Chromosome 13 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
Names
glucosaminyl (N-acetyl) transferase 4, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034582.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    90554880..90580637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021180377.1 → XP_021036036.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4

    UniProtKB/TrEMBL
    A0A6P7PTF8
    Related
    MGP_CAROLIEiJ_P0035208, MGP_CAROLIEiJ_T0035208.1
    Conserved Domains (1) summary
    cl27418
    Location:134 → 402
    Branch; Core-2/I-Branching enzyme

  2. XM_029468622.1 → XP_029324482.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4

    UniProtKB/TrEMBL
    A0A6P7PTF8
    Conserved Domains (1) summary
    cl27418
    Location:134 → 402
    Branch; Core-2/I-Branching enzyme

  3. XM_029468623.1 → XP_029324483.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4

    UniProtKB/TrEMBL
    A0A6P7PTF8
    Conserved Domains (1) summary
    cl27418
    Location:134 → 402
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
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