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Pomt2 protein O-mannosyltransferase 2 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110307413, updated on 15-Mar-2024

Summary

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Gene symbol
Pomt2
Gene description
protein O-mannosyltransferase 2
See related
Ensembl:MGP_CAROLIEiJ_G0017985
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Pomt2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 12 NC_034581.1 (81539344..81580636, complement)

Chromosome 12 - NC_034581.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 63C Neighboring gene neuroglobin Neighboring gene cytochrome c oxidase subunit 6C-2-like Neighboring gene glutathione S-transferase zeta 1 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene sterile alpha motif domain containing 15 Neighboring gene NADP dependent oxidoreductase domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034581.1 Chromosome 12 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034581.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    81539344..81580636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021179657.2 → XP_021035316.1  protein O-mannosyl-transferase 2

    UniProtKB/TrEMBL
    A0A6P5QXI2
    Related
    MGP_CAROLIEiJ_P0032966, MGP_CAROLIEiJ_T0032966.1
    Conserved Domains (1) summary
    COG1928
    Location:134 → 820
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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