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Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110305250, updated on 15-Mar-2024

Summary

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Gene symbol
Galnt10
Gene description
polypeptide N-acetylgalactosaminyltransferase 10
See related
Ensembl:MGP_CAROLIEiJ_G0016380
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Galnt10 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 11 NC_034580.1 (52471979..52613867)

Chromosome 11 - NC_034580.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 114 member A2 Neighboring gene microfibril associated protein 3 Neighboring gene uncharacterized LOC110305251 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC115032317 Neighboring gene ATP-dependent RNA helicase RhlB-like Neighboring gene SAP30 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034580.1 Chromosome 11 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034580.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    52471979..52613867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021177122.2 → XP_021032781.1  polypeptide N-acetylgalactosaminyltransferase 10 isoform X1

    UniProtKB/TrEMBL
    A0A6P5QP67
    Related
    MGP_CAROLIEiJ_P0026795, MGP_CAROLIEiJ_T0026795.1
    Conserved Domains (2) summary
    cd02510
    Location:148 → 443
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:459 → 587
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_029484011.1 → XP_029339871.1  polypeptide N-acetylgalactosaminyltransferase 10 isoform X2

    UniProtKB/TrEMBL
    A0A6P7RWB5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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