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Dpy19l2 dpy-19 like 2 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110301326, updated on 15-Mar-2024

Summary

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Gene symbol
Dpy19l2
Gene description
dpy-19 like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Dpy19l2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
22
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 9 NC_034578.1 (20452804..20581906, complement)

Chromosome 9 - NC_034578.1Genomic Context describing neighboring genes Neighboring gene neuropeptide S receptor 1 Neighboring gene uncharacterized LOC115031937 Neighboring gene dpy-19 like C-mannosyltransferase 1 Neighboring gene cysteine-rich perinuclear theca protein 1 pseudogene Neighboring gene DNA topoisomerase 1-like Neighboring gene endogenous retrovirus group K member 10 Gag polyprotein-like Neighboring gene T-box transcription factor 20 Neighboring gene S-adenosylmethionine decarboxylase proenzyme 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034578.1 Chromosome 9 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034578.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    20452804..20581906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021171758.1 → XP_021027417.1  probable C-mannosyltransferase DPY19L2

    UniProtKB/TrEMBL
    A0A6P5QBE8
    Conserved Domains (1) summary
    pfam10034
    Location:130 → 771
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
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