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Gys1 glycogen synthase 1 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110299309, updated on 18-Sep-2024

Summary

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Gene symbol
Gys1
Gene description
glycogen synthase 1
See related
Ensembl:MGP_CAROLIEiJ_G0029719
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Gys1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 7 NC_034576.1 (47371936..47391725)

Chromosome 7 - NC_034576.1Genomic Context describing neighboring genes Neighboring gene lutropin subunit beta Neighboring gene RuvB like AAA ATPase 2 Neighboring gene ferritin light chain Neighboring gene BCL2 associated X, apoptosis regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034576.1 Chromosome 7 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034576.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    47371936..47391725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021168983.2 → XP_021024642.1  glycogen [starch] synthase, muscle

    UniProtKB/TrEMBL
    A0A6P5Q4I7
    Related
    MGP_CAROLIEiJ_P0079515, MGP_CAROLIEiJ_T0079515.1
    Conserved Domains (2) summary
    pfam05693
    Location:31 → 663
    Glycogen_syn; Glycogen synthase
    pfam15151
    Location:645 → 732
    RGCC; Response gene to complement 32 protein family
Nucleotide Protein
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