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Cnga4 cyclic nucleotide gated channel subunit alpha 4 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110299160, updated on 11-Apr-2024

Summary

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Gene symbol
Cnga4
Gene description
cyclic nucleotide gated channel subunit alpha 4
See related
Ensembl:MGP_CAROLIEiJ_G0030226
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Cnga4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 7 NC_034576.1 (107790514..107794695)

Chromosome 7 - NC_034576.1Genomic Context describing neighboring genes Neighboring gene chromosome 7 C11orf42 homolog Neighboring gene FHF complex subunit HOOK interacting protein 1B Neighboring gene cholecystokinin B receptor Neighboring gene caveolae associated protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034576.1 Chromosome 7 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cGMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cAMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cGMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intracellular cyclic nucleotide activated cation channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic nucleotide-gated cation channel alpha-4
Names
cyclic nucleotide gated channel alpha 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034576.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    107790514..107794695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021168786.1 → XP_021024445.1  cyclic nucleotide-gated cation channel alpha-4

    UniProtKB/TrEMBL
    A0A6P5QB09
    Related
    MGP_CAROLIEiJ_P0081294, MGP_CAROLIEiJ_T0081294.1
    Conserved Domains (3) summary
    cd00038
    Location:348 → 464
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:34 → 273
    Ion_trans; Ion transport protein
    pfam16526
    Location:464 → 535
    CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
Nucleotide Protein
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