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LOC110298382 galactoside 2-alpha-L-fucosyltransferase 3 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110298382, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110298382
Gene description
galactoside 2-alpha-L-fucosyltransferase 3
See related
Ensembl:MGP_CAROLIEiJ_G0029735
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See LOC110298382 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 7 NC_034576.1 (47628446..47644860, complement)

Chromosome 7 - NC_034576.1Genomic Context describing neighboring genes Neighboring gene MEF2 activating motif and SAP domain containing transcriptional regulator Neighboring gene fucosyltransferase 2 (H blood group) Neighboring gene netrin 5 Neighboring gene carbonic anhydrase 11 Neighboring gene D-box binding PAR bZIP transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034576.1 Chromosome 7 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 2-alpha-L-fucosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034576.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    47628446..47644860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021167595.2 → XP_021023254.1  galactoside 2-alpha-L-fucosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P5Q8E1
    Related
    MGP_CAROLIEiJ_P0079584, MGP_CAROLIEiJ_T0079584.1
    Conserved Domains (1) summary
    pfam01531
    Location:55 → 362
    Glyco_transf_11; Glycosyl transferase family 11

  2. XM_021167594.1 → XP_021023253.1  galactoside 2-alpha-L-fucosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P5PWE2
    Conserved Domains (1) summary
    pfam01531
    Location:64 → 371
    Glyco_transf_11; Glycosyl transferase family 11
Nucleotide Protein
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