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Lman2l lectin, mannose binding 2 like [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110296629, updated on 19-Jun-2024

Summary

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Gene symbol
Lman2l
Gene description
lectin, mannose binding 2 like
See related
Ensembl:MGP_CAROLIEiJ_G0014036
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Lman2l in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 1 NC_034570.1 (31072080..31093517, complement)

Chromosome 1 - NC_034570.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034570.1 Chromosome 1 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034570.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    31072080..31093517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021165376.1 → XP_021021035.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6P5PVY1
    Related
    MGP_CAROLIEiJ_P0017119, MGP_CAROLIEiJ_T0017119.1
    Conserved Domains (1) summary
    cl14058
    Location:49 → 297
    lectin_L-type; legume lectins

  2. XM_029478240.1 → XP_029334100.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6P7RAY4
    Related
    MGP_CAROLIEiJ_P0017122, MGP_CAROLIEiJ_T0017122.1
    Conserved Domains (1) summary
    cl14058
    Location:49 → 308
    lectin_L-type; legume lectins

  3. XM_021165765.1 → XP_021021424.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A6P5PZM7
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins

RNA

  1. XR_003836887.1 RNA Sequence

    Related
    MGP_CAROLIEiJ_T0017121.1
Nucleotide Protein
Heading Accession and Version

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