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Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110292953, updated on 15-Mar-2024

Summary

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Gene symbol
Galnt12
Gene description
polypeptide N-acetylgalactosaminyltransferase 12
See related
Ensembl:MGP_CAROLIEiJ_G0025994
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Galnt12 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 4 NC_034573.1 (41132061..41159749)

Chromosome 4 - NC_034573.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and sterile alpha motif domain containing 6 Neighboring gene 40S ribosomal protein S17 pseudogene Neighboring gene collagen type XV alpha 1 chain Neighboring gene transforming growth factor beta receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034573.1 Chromosome 4 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034573.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    41132061..41159749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021160646.2 → XP_021016305.1  polypeptide N-acetylgalactosaminyltransferase 12

    UniProtKB/TrEMBL
    A0A6P5PFD3
    Related
    MGP_CAROLIEiJ_P0062285, MGP_CAROLIEiJ_T0062285.1
    Conserved Domains (2) summary
    cd02510
    Location:134 → 428
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:440 → 569
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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