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Rpn2 ribophorin II [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110290419, updated on 15-Mar-2024

Summary

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Gene symbol
Rpn2
Gene description
ribophorin II
See related
Ensembl:MGP_CAROLIEiJ_G0024573
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Rpn2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 2 NC_034571.1 (149242014..149289693)

Chromosome 2 - NC_034571.1Genomic Context describing neighboring genes Neighboring gene RB transcriptional corepressor like 1 Neighboring gene U7 small nuclear RNA Neighboring gene maestro heat like repeat family member 8 Neighboring gene growth hormone releasing hormone Neighboring gene mannosidase beta like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034571.1 Chromosome 2 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034571.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    149242014..149289693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021156957.2 → XP_021012616.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P5PBX5
    Related
    MGP_CAROLIEiJ_P0055765, MGP_CAROLIEiJ_T0055765.1
    Conserved Domains (1) summary
    pfam05817
    Location:9 → 623
    Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II

  2. XM_021156958.2 → XP_021012617.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P5PE76
    Related
    MGP_CAROLIEiJ_P0055764, MGP_CAROLIEiJ_T0055764.1
    Conserved Domains (1) summary
    pfam05817
    Location:9 → 623
    Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II
Nucleotide Protein
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