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Cnga2 cyclic nucleotide gated channel subunit alpha 2 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110287256, updated on 11-Apr-2024

Summary

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Gene symbol
Cnga2
Gene description
cyclic nucleotide gated channel subunit alpha 2
See related
Ensembl:MGP_CAROLIEiJ_G0033137
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Cnga2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) X NC_034589.1 (67135479..67153514)

Chromosome X - NC_034589.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110286202 Neighboring gene proline rich and Gla domain 3 Neighboring gene melanoma-associated antigen 10-like Neighboring gene gamma-aminobutyric acid type A receptor subunit epsilon

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034589.1 Chromosome X Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cGMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cAMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cGMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intracellular cyclic nucleotide activated cation channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic nucleotide-gated olfactory channel
Names
cyclic nucleotide gated channel alpha 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034589.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    67135479..67153514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021153913.1 → XP_021009572.1  cyclic nucleotide-gated olfactory channel

    UniProtKB/TrEMBL
    A0A6P5P435
    Related
    MGP_CAROLIEiJ_P0091642, MGP_CAROLIEiJ_T0091642.1
    Conserved Domains (4) summary
    cd00038
    Location:456 → 572
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:142 → 384
    Ion_trans; Ion transport protein
    pfam16526
    Location:572 → 641
    CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
    cl18962
    Location:417 → 470
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
Nucleotide Protein
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