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Chst9 carbohydrate sulfotransferase 9 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110284948, updated on 15-Mar-2024

Summary

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Gene symbol
Chst9
Gene description
carbohydrate sulfotransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Chst9 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 18 NC_034587.1 (11980608..12253985, complement)

Chromosome 18 - NC_034587.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110284665 Neighboring gene rRNA 2'-O-methyltransferase fibrillarin pseudogene Neighboring gene aquaporin 4 Neighboring gene uncharacterized LOC110284949 Neighboring gene small nucleolar RNA SNORA17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034587.1 Chromosome 18 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034587.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    11980608..12253985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021150961.2 → XP_021006620.1  carbohydrate sulfotransferase 9

    UniProtKB/TrEMBL
    A0A6P5NZK6
    Conserved Domains (1) summary
    pfam03567
    Location:133 → 362
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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