U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

JKAMP JNK1/MAPK8 associated membrane protein [ Sus scrofa (pig) ]

Gene ID: 110262314, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
JKAMPprovided by VGNC
Official Full Name
JNK1/MAPK8 associated membrane proteinprovided by VGNC
Primary source
VGNC:VGNC:89284
See related
Ensembl:ENSSSCG00000034798
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 19.9), ovary (RPKM 13.7) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See JKAMP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (188598456..188617705)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene dishevelled associated activator of morphogenesis 1 Neighboring gene uncharacterized LOC102167425 Neighboring gene trans-L-3-hydroxyproline dehydratase Neighboring gene G protein-coupled receptor 135 Neighboring gene coiled-coil domain containing 175 Neighboring gene reticulon 1 Neighboring gene leucine rich repeat containing 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_010443.5 Chromosome 1 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to unfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
JNK1/MAPK8-associated membrane protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    188598456..188617705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021102711.1 → XP_020958370.1  JNK1/MAPK8-associated membrane protein isoform X1

    UniProtKB/TrEMBL
    A0A287AIT1, A0A287BGE6, A0A4X1WCY0, A0A4X1WD45, A0A8D0UB12, A0A8D1EA48
    Related
    ENSSSCP00000043913.2, ENSSSCT00000050869.2
    Conserved Domains (1) summary
    pfam05571
    Location:9 → 300
    DUF766; Protein of unknown function (DUF766)

  2. XM_021102716.1 → XP_020958375.1  JNK1/MAPK8-associated membrane protein isoform X2

    UniProtKB/TrEMBL
    A0A287BGE6, A0A4X1WCY0, A0A8D1EA48
    Conserved Domains (1) summary
    pfam05571
    Location:3 → 294
    DUF766; Protein of unknown function (DUF766)

  3. XM_021102718.1 → XP_020958377.1  JNK1/MAPK8-associated membrane protein isoform X3

    Conserved Domains (1) summary
    pfam05571
    Location:1 → 237
    DUF766; Protein of unknown function (DUF766)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.