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UBAP1L ubiquitin associated protein 1 like [ Sus scrofa (pig) ]

Gene ID: 110261753, updated on 17-Aug-2024

Summary

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Official Symbol
UBAP1Lprovided by VGNC
Official Full Name
ubiquitin associated protein 1 likeprovided by VGNC
Primary source
VGNC:VGNC:94634
See related
Ensembl:ENSSSCG00000035506
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See UBAP1L in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (163133230..163153941, complement)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene SLC51 subunit beta Neighboring gene RAS like family 12 Neighboring gene kelch repeat and BTB domain containing 13 Neighboring gene programmed cell death 7 Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit X

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010443.5 Chromosome 1 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    163133230..163153941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021100075.1 → XP_020955734.1  ubiquitin-associated protein 1-like

    UniProtKB/TrEMBL
    A0A8D1RW62, A0A8D2BM51
    Conserved Domains (1) summary
    cd14316
    Location:352 → 388
    UBA2_UBAP1_like; UBA2 domain found in ubiquitin-associated protein 1 (UBAP-1) and similar proteins

  2. XM_021100070.1 → XP_020955729.1  ubiquitin-associated protein 1-like

    UniProtKB/TrEMBL
    A0A8D1RW62, A0A8D2BM51
    Related
    ENSSSCP00000054290.3, ENSSSCT00000041328.3
    Conserved Domains (1) summary
    cd14316
    Location:352 → 388
    UBA2_UBAP1_like; UBA2 domain found in ubiquitin-associated protein 1 (UBAP-1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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