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BMF Bcl2 modifying factor [ Sus scrofa (pig) ]

Gene ID: 110261428, updated on 17-Aug-2024

Summary

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Official Symbol
BMFprovided by VGNC
Official Full Name
Bcl2 modifying factorprovided by VGNC
Primary source
VGNC:VGNC:85837
See related
Ensembl:ENSSSCG00000035284
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in lung (RPKM 18.3), ovary (RPKM 16.9) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See BMF in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (131178021..131199668)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 63 Neighboring gene p21 (RAC1) activated kinase 6 Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase B Neighboring gene uncharacterized LOC110261466 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 4 Neighboring gene signal recognition particle 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010443.5 Chromosome 1 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bcl-2-modifying factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    131178021..131199668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021097837.1 → XP_020953496.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  2. XM_021097833.1 → XP_020953492.1  bcl-2-modifying factor isoform X2

  3. XM_021097841.1 → XP_020953500.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  4. XM_021097855.1 → XP_020953514.1  bcl-2-modifying factor isoform X5

    UniProtKB/TrEMBL
    A0A287BML0, A0A8D1EA66, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 168
    BMF; Bcl-2-modifying factor, apoptosis

  5. XM_021097846.1 → XP_020953505.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Related
    ENSSSCP00000045704.1, ENSSSCT00000063022.3
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  6. XM_021097854.1 → XP_020953513.1  bcl-2-modifying factor isoform X5

    UniProtKB/TrEMBL
    A0A287BML0, A0A8D1EA66, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 168
    BMF; Bcl-2-modifying factor, apoptosis

  7. XM_021097831.1 → XP_020953490.1  bcl-2-modifying factor isoform X1

    UniProtKB/TrEMBL
    A0A8D1R5U3, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:26 → 196
    BMF; Bcl-2-modifying factor, apoptosis

  8. XM_021097848.1 → XP_020953507.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  9. XM_021097840.1 → XP_020953499.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  10. XM_021097853.1 → XP_020953512.1  bcl-2-modifying factor isoform X5

    UniProtKB/TrEMBL
    A0A287BML0, A0A8D1EA66, M3VH85
    Related
    ENSSSCP00000057417.2, ENSSSCT00000047289.2
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 168
    BMF; Bcl-2-modifying factor, apoptosis

  11. XM_021097847.1 → XP_020953506.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  12. XM_021097857.1 → XP_020953516.1  bcl-2-modifying factor isoform X5

    UniProtKB/TrEMBL
    A0A287BML0, A0A8D1EA66, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 168
    BMF; Bcl-2-modifying factor, apoptosis

  13. XM_021097851.1 → XP_020953510.1  bcl-2-modifying factor isoform X4

    UniProtKB/TrEMBL
    M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:26 → 181
    BMF; Bcl-2-modifying factor, apoptosis

  14. XM_021097829.1 → XP_020953488.1  bcl-2-modifying factor isoform X1

    UniProtKB/TrEMBL
    A0A8D1R5U3, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:26 → 196
    BMF; Bcl-2-modifying factor, apoptosis

  15. XM_021097842.1 → XP_020953501.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis

  16. XM_021097844.1 → XP_020953503.1  bcl-2-modifying factor isoform X3

    UniProtKB/TrEMBL
    A0A287AIU8, A0A4X1UQ42, A0A8D0WCZ8, M3VH85
    Conserved Domains (1) summary
    pfam15185
    Location:13 → 183
    BMF; Bcl-2-modifying factor, apoptosis
Nucleotide Protein
Heading Accession and Version

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