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LOC110259431 uncharacterized LOC110259431 [ Sus scrofa (pig) ]

Gene ID: 110259431, updated on 24-Jun-2020

Summary

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Gene symbol
LOC110259431
Gene description
uncharacterized LOC110259431
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 1.3), spleen (RPKM 1.2) and 8 other tissues See more
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Genomic context

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See LOC110259431 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (72517104..72541418)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106507207 Neighboring gene PR/SET domain 1 Neighboring gene autophagy related 5 Neighboring gene crystallin beta-gamma domain containing 1 Neighboring gene reticulon 4 interacting protein 1 Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010443.5 Chromosome 1 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein LOC110259431

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    72517104..72541418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021084599.1 → XP_020940258.1  uncharacterized protein LOC110259431

    Conserved Domains (1) summary
    cl26464
    Location:43 → 201
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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