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LOC110247921 carbohydrate sulfotransferase 11-like [ Exaiptasia diaphana ]

Gene ID: 110247921, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110247921
Gene description
carbohydrate sulfotransferase 11-like
See related
EnsemblRapid:LOC110247921
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
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Genomic context

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See LOC110247921 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018387870.1 (674574..676570)

NW_018387870.1Genomic Context describing neighboring genes Neighboring gene protein lin-37 homolog Neighboring gene DNA repair protein RAD52 homolog Neighboring gene pleckstrin-2 Neighboring gene integrator complex subunit 13 Neighboring gene amiloride-sensitive amine oxidase [copper-containing]

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018387870 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018387870.1 Reference Aiptasia genome 1.1

    Range
    674574..676570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021054416.2 → XP_020910075.1  carbohydrate sulfotransferase 11-like

    UniProtKB/TrEMBL
    A0A913XUN4
    Related
    XP_020910075.1, XM_021054416.2
    Conserved Domains (1) summary
    pfam03567
    Location:57 → 284
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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