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LOC110238283 elongation of very long chain fatty acids protein 4 [ Exaiptasia diaphana ]

Gene ID: 110238283, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110238283
Gene description
elongation of very long chain fatty acids protein 4
Locus tag
AC249_AIPGENE9951
See related
EnsemblRapid:LOC110238283
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
ELOVL4
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Genomic context

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See LOC110238283 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018385444.1 (186939..193061, complement)

NW_018385444.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110238221 Neighboring gene uncharacterized LOC110238281 Neighboring gene uncharacterized LOC114574973 Neighboring gene elongation of very long chain fatty acids protein 4 Neighboring gene ankyrin repeat and BTB/POZ domain-containing protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018385444 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation of very long chain fatty acids protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018385444.1 Reference Aiptasia genome 1.1

    Range
    186939..193061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021043940.2 → XP_020899599.1  elongation of very long chain fatty acids protein 4

    UniProtKB/TrEMBL
    A0A913X673
    Related
    XP_020899599.1, XM_021043940.2
    Conserved Domains (1) summary
    pfam01151
    Location:29 → 263
    ELO; GNS1/SUR4 family

  2. XM_028658836.1 → XP_028514637.1  elongation of very long chain fatty acids protein 4

    UniProtKB/TrEMBL
    A0A913X673
    Related
    XP_028514637.1, XM_028658836.1
    Conserved Domains (1) summary
    pfam01151
    Location:29 → 263
    ELO; GNS1/SUR4 family
Nucleotide Protein
Heading Accession and Version

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