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LOC110237518 probable C-mannosyltransferase DPY19L1 [ Exaiptasia diaphana ]

Gene ID: 110237518, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110237518
Gene description
probable C-mannosyltransferase DPY19L1
Locus tag
AC249_AIPGENE14701
See related
EnsemblRapid:LOC110237518
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
DPY19L1
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Genomic context

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See LOC110237518 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018385351.1 (17075..26223, complement)

NW_018385351.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat extensin-like protein 3 Neighboring gene leucine-rich repeat extensin-like protein 3 Neighboring gene solute carrier family 22 member 15 Neighboring gene TNF receptor-associated factor 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018385351 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L1
Names
putative C-mannosyltransferase DPY19L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018385351.1 Reference Aiptasia genome 1.1

    Range
    17075..26223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021043117.2 → XP_020898776.1  probable C-mannosyltransferase DPY19L1

    UniProtKB/TrEMBL
    A0A913X5B0
    Related
    XP_020898776.1, XM_021043117.2
    Conserved Domains (1) summary
    pfam10034
    Location:53 → 703
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

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