U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110235209 fukutin [ Exaiptasia diaphana ]

Gene ID: 110235209, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110235209
Gene description
fukutin
Locus tag
AC249_AIPGENE16122
See related
EnsemblRapid:LOC110235209
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
FKTN
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110235209 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018385023.1 (194028..199166)

NW_018385023.1Genomic Context describing neighboring genes Neighboring gene acetylcholine receptor subunit beta Neighboring gene neuronal acetylcholine receptor subunit alpha-7 Neighboring gene uncharacterized LOC110235207 Neighboring gene E3 ubiquitin-protein ligase TRIM71 Neighboring gene E3 ubiquitin-protein ligase TRIM56

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018385023 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
fukutin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018385023.1 Reference Aiptasia genome 1.1

    Range
    194028..199166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021040653.2 → XP_020896312.1  fukutin isoform X2

    UniProtKB/TrEMBL
    A0A913WYY6
    Related
    XP_020896312.1, XM_021040653.2
    Conserved Domains (1) summary
    cl01378
    Location:293 → 339
    LicD; LicD family

  2. XM_021040652.2 → XP_020896311.1  fukutin isoform X1

    UniProtKB/TrEMBL
    A0A913WZ07
    Related
    XP_020896311.1, XM_021040652.2
    Conserved Domains (1) summary
    cl01378
    Location:293 → 339
    LicD; LicD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.