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LOC110231987 protein O-mannosyl-transferase 1 [ Exaiptasia diaphana ]

Gene ID: 110231987, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110231987
Gene description
protein O-mannosyl-transferase 1
Locus tag
AC249_AIPGENE25525
See related
EnsemblRapid:LOC110231987
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
Pomt1
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC110231987 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018384590.1 (54646..62006, complement)

NW_018384590.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting-associated protein 13B-like Neighboring gene FK506-binding protein 15 Neighboring gene zinc transporter SLC39A7 Neighboring gene G-protein-signaling modulator 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018384590 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018384590.1 Reference Aiptasia genome 1.1

    Range
    54646..62006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021037066.2 → XP_020892725.2  protein O-mannosyl-transferase 1

    UniProtKB/TrEMBL
    A0A913WQV3
    Related
    XP_020892725.2, XM_021037066.2
    Conserved Domains (1) summary
    COG1928
    Location:70 → 769
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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