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LOC110231822 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [ Exaiptasia diaphana ]

Gene ID: 110231822, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110231822
Gene description
2-hydroxyacylsphingosine 1-beta-galactosyltransferase
Locus tag
AC249_AIPGENE7524
See related
EnsemblRapid:LOC110231822
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
UGT8
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Genomic context

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See LOC110231822 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018384568.1 (297694..302128, complement)

NW_018384568.1Genomic Context describing neighboring genes Neighboring gene pirin-like protein Neighboring gene pyridoxal kinase Neighboring gene 2-hydroxyacylsphingosine 1-beta-galactosyltransferase Neighboring gene UDP-glucuronosyltransferase 1-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018384568 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018384568.1 Reference Aiptasia genome 1.1

    Range
    297694..302128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028656919.1 → XP_028512720.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A913YBP8
    Related
    XP_028512720.1, XM_028656919.1
    Conserved Domains (1) summary
    pfam00201
    Location:12 → 466
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

  2. XM_021036882.2 → XP_020892541.2  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A913WQF0
    Related
    XP_020892541.2, XM_021036882.2
    Conserved Domains (1) summary
    pfam00201
    Location:24 → 360
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
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Gene LinkOut

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