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LOC110221664 histone-arginine methyltransferase CARM1-like [ Phascolarctos cinereus (koala) ]

Gene ID: 110221664, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110221664
Gene description
histone-arginine methyltransferase CARM1-like
See related
Ensembl:ENSPCIG00000030606
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
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Genomic context

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See LOC110221664 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344065.1 (5286811..5539443)

NW_018344065.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene regulatory factor X3 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene ATP-binding cassette sub-family A member 3-like Neighboring gene pumilio RNA binding family member 3 Neighboring gene 14-3-3 protein zeta/delta pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344065 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-arginine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-arginine methyltransferase CARM1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344065.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    5286811..5539443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021006366.1 → XP_020862025.1  histone-arginine methyltransferase CARM1-like isoform X2

    UniProtKB/TrEMBL
    A0A6P5LU17
    Conserved Domains (2) summary
    pfam05185
    Location:172 → 393
    PRMT5; PRMT5 arginine-N-methyltransferase
    cl17171
    Location:27 → 134
    PH-like; Pleckstrin homology-like domain

  2. XM_021006365.1 → XP_020862024.1  histone-arginine methyltransferase CARM1-like isoform X1

    UniProtKB/TrEMBL
    A0A6P5M0L3
    Related
    ENSPCIP00000041953.2, ENSPCIT00000051652.2
    Conserved Domains (3) summary
    cd02440
    Location:183 → 278
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam05185
    Location:159 → 430
    PRMT5; PRMT5 arginine-N-methyltransferase
    cl17171
    Location:27 → 134
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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