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GFRA1 GDNF family receptor alpha 1 [ Phascolarctos cinereus (koala) ]

Gene ID: 110209538, updated on 15-Mar-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
Ensembl:ENSPCIG00000023812
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343982.1 (12997698..13807441, complement)

NW_018343982.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110209537 Neighboring gene COMM domain-containing protein 7 pseudogene Neighboring gene coiled-coil domain containing 172 Neighboring gene pancreatic triacylglycerol lipase-like Neighboring gene uncharacterized LOC110209544 Neighboring gene pancreatic triacylglycerol lipase-like Neighboring gene pancreatic triacylglycerol lipase-like Neighboring gene pancreatic triacylglycerol lipase-like Neighboring gene inactive pancreatic lipase-related protein 1-like Neighboring gene pancreatic lipase-related protein 2-like Neighboring gene sperm microtubule inner protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343982 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343982.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    12997698..13807441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020988145.1 → XP_020843804.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KE40
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  2. XM_020988146.1 → XP_020843805.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KE40
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  3. XM_020988144.1 → XP_020843803.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KE40
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  4. XM_020988147.1 → XP_020843806.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KE40
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  5. XM_020988148.1 → XP_020843807.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KE40
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  6. XM_020988149.1 → XP_020843808.1  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5KE44
    Related
    ENSPCIP00000032097.2, ENSPCIT00000039462.2
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:238 → 332
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
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