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A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Phascolarctos cinereus (koala) ]

Gene ID: 110205872, updated on 15-Mar-2024

Summary

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Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
See related
Ensembl:ENSPCIG00000006631
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343965.1 (16256211..16310145, complement)

NW_018343965.1Genomic Context describing neighboring genes Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene poly(U)-specific endoribonuclease-like Neighboring gene uncharacterized LOC110205875 Neighboring gene ARF GTPase activating protein 3 Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene fatty acid-binding protein, brain pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343965 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343965.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    16256211..16310145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020982785.1 → XP_020838444.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6P5K019
    Related
    ENSPCIP00000007956.1, ENSPCIT00000010031.2
    Conserved Domains (2) summary
    pfam04572
    Location:274 → 396
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:138 → 261
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

RNA

  1. XR_002323724.1 RNA Sequence

  2. XR_002323725.1 RNA Sequence

  3. XR_002323726.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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