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LOC110201599 pulmonary surfactant-associated protein D-like [ Phascolarctos cinereus (koala) ]

Gene ID: 110201599, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110201599
Gene description
pulmonary surfactant-associated protein D-like
See related
Ensembl:ENSPCIG00000001128
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
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Genomic context

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See LOC110201599 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344264.1 (2132718..2143573, complement)

NW_018344264.1Genomic Context describing neighboring genes Neighboring gene mannose-binding protein C-like Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene pulmonary surfactant-associated protein D-like Neighboring gene pulmonary surfactant-associated protein D-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344264 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344264.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    2132718..2143573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020977373.1 → XP_020833032.1  pulmonary surfactant-associated protein D-like

    UniProtKB/TrEMBL
    A0A6P5JFH4
    Related
    ENSPCIP00000001386.2, ENSPCIT00000001744.2
    Conserved Domains (2) summary
    pfam01391
    Location:38 → 94
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:140 → 252
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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