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CD72 CD72 molecule [ Phascolarctos cinereus (koala) ]

Gene ID: 110201430, updated on 15-Mar-2024

Summary

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Gene symbol
CD72
Gene description
CD72 molecule
See related
Ensembl:ENSPCIG00000021674
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See CD72 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344260.1 (1501906..1510601)

NW_018344260.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110201458 Neighboring gene signaling threshold regulating transmembrane adaptor 1 Neighboring gene testis associated actin remodelling kinase 1 Neighboring gene ciliary microtubule inner protein 2B Neighboring gene RUN and SH3 domain containing 2 Neighboring gene uncharacterized LOC110201432

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344260 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell differentiation antigen CD72

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344260.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    1501906..1510601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020977041.1 → XP_020832700.1  B-cell differentiation antigen CD72 isoform X1

    UniProtKB/TrEMBL
    A0A6P5JER2
    Related
    ENSPCIP00000029095.1, ENSPCIT00000035796.2
    Conserved Domains (2) summary
    cl02432
    Location:250 → 355
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl27672
    Location:148 → 223
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...

  2. XM_020977042.1 → XP_020832701.1  B-cell differentiation antigen CD72 isoform X2

    UniProtKB/TrEMBL
    A0A6P5JND1
    Conserved Domains (2) summary
    smart00034
    Location:250 → 312
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    cl27672
    Location:148 → 223
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
Nucleotide Protein
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