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LOC110188931 aspartyl/asparaginyl beta-hydroxylase [ Drosophila serrata ]

Gene ID: 110188931, updated on 10-May-2024

Summary

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Gene symbol
LOC110188931
Gene description
aspartyl/asparaginyl beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila serrata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC110188931 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Dser1.0 (GCF_002093755.1) Unplaced Scaffold NW_018367510.1 (88953..95899, complement)

NW_018367510.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110188941 Neighboring gene uncharacterized LOC110188942 Neighboring gene uncharacterized LOC110188938 Neighboring gene Ras-related protein interacting with calmodulin Neighboring gene ras-like GTP-binding protein Rho1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018367510 Unplaced Scaffold Reference Dser1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FK506-binding protein 5; aspartyl/asparaginyl beta-hydroxylase; cilia- and flagella-associated protein 251

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila serrata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dser1.0

Genomic

  1. NW_018367510.1 Reference Dser1.0

    Range
    88953..95899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020958867.1 → XP_020814526.1  aspartyl/asparaginyl beta-hydroxylase isoform X10

    Conserved Domains (3) summary
    COG0457
    Location:570 → 772
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:728 → 759
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:834 → 988
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  2. XM_020958862.1 → XP_020814521.1  aspartyl/asparaginyl beta-hydroxylase isoform X6

    Conserved Domains (3) summary
    COG0457
    Location:580 → 782
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:738 → 769
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:844 → 998
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  3. XM_020958861.1 → XP_020814520.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

    Conserved Domains (3) summary
    COG0457
    Location:581 → 783
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:739 → 770
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:845 → 999
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  4. XM_020958858.1 → XP_020814517.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Conserved Domains (3) summary
    COG0457
    Location:598 → 800
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:756 → 787
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:862 → 1016
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  5. XM_020958860.1 → XP_020814519.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

    Conserved Domains (3) summary
    COG0457
    Location:588 → 790
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:746 → 777
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:852 → 1006
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  6. XM_020958859.1 → XP_020814518.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

    Conserved Domains (3) summary
    COG0457
    Location:589 → 791
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:747 → 778
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:853 → 1007
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  7. XM_020958857.1 → XP_020814516.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Conserved Domains (3) summary
    COG0457
    Location:599 → 801
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:757 → 788
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:863 → 1017
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  8. XM_020958863.1 → XP_020814522.1  aspartyl/asparaginyl beta-hydroxylase isoform X7

    Conserved Domains (3) summary
    COG0457
    Location:377 → 579
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:535 → 566
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:641 → 795
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  9. XM_020958868.1 → XP_020814527.1  aspartyl/asparaginyl beta-hydroxylase isoform X11

    Conserved Domains (3) summary
    COG0457
    Location:359 → 561
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:517 → 548
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:623 → 777
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  10. XM_020958864.1 → XP_020814523.1  FK506-binding protein 5 isoform X8

    Conserved Domains (1) summary
    pfam13432
    Location:613 → 680
    TPR_16; Tetratricopeptide repeat

  11. XM_020958866.1 → XP_020814525.1  FK506-binding protein 5 isoform X9

  12. XM_020958869.1 → XP_020814528.1  cilia- and flagella-associated protein 251 isoform X12

Nucleotide Protein Strain
Heading Accession and Version

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