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LOC110182186 delta-sarcoglycan [ Drosophila serrata ]

Gene ID: 110182186, updated on 10-May-2024

Summary

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Gene symbol
LOC110182186
Gene description
delta-sarcoglycan
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila serrata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC110182186 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Dser1.0 (GCF_002093755.1) Unplaced Scaffold NW_018367048.1 (315550..346579, complement)

NW_018367048.1Genomic Context describing neighboring genes Neighboring gene trypsin-2 Neighboring gene STIP1 homology and U box-containing protein 1-like Neighboring gene RING finger protein 37-like Neighboring gene uncharacterized LOC110182191 Neighboring gene Adenosine deaminase acting on RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018367048 Unplaced Scaffold Reference Dser1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila serrata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dser1.0

Genomic

  1. NW_018367048.1 Reference Dser1.0

    Range
    315550..346579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020950190.1 → XP_020805849.1  delta-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:153 → 411
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_020950189.1 → XP_020805848.1  delta-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:153 → 411
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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