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LOC110174521 beta-1,4 N-acetylgalactosaminyltransferase 2-like [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110174521, updated on 16-Nov-2023

Summary

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Gene symbol
LOC110174521
Gene description
beta-1,4 N-acetylgalactosaminyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
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Genomic context

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See LOC110174521 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571140.1 (1817863..1875850, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018361554.1 (602466..653757)

NW_026571140.1Genomic Context describing neighboring genes Neighboring gene hepatic sodium/bile acid cotransporter-like Neighboring gene kinesin-like protein KIF23 Neighboring gene uncharacterized LOC129409291 Neighboring gene uncharacterized LOC129409262

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571140.1 Reference ASM2622593v1 Primary Assembly

    Range
    1817863..1875850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020940624.2 → XP_020796283.2  beta-1,4 N-acetylgalactosaminyltransferase 2-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases