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colgalt2b collagen beta(1-O)galactosyltransferase 2b [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110174093, updated on 15-Mar-2024

Summary

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Gene symbol
colgalt2b
Gene description
collagen beta(1-O)galactosyltransferase 2b
Locus tag
NL108_005666
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Also known as
colgalt2
Orthologs
zebrafish all
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Genomic context

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See colgalt2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571473.1 (19474372..19493505, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018361276.1 (297648..316642, complement)

NW_026571473.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110174046 Neighboring gene uncharacterized LOC129412090 Neighboring gene uncharacterized LOC110174066 Neighboring gene ER degradation enhancer, mannosidase alpha-like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2
Names
collagen beta(1-O)galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571473.1 Reference ASM2622593v1 Primary Assembly

    Range
    19474372..19493505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020940146.2 → XP_020795805.2  procollagen galactosyltransferase 2

Nucleotide Protein
Heading Accession and Version

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