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chst3a carbohydrate (chondroitin 6) sulfotransferase 3a [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110173627, updated on 15-Mar-2024

Summary

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Gene symbol
chst3a
Gene description
carbohydrate (chondroitin 6) sulfotransferase 3a
Locus tag
NL108_012823
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Also known as
chst3
Orthologs
human zebrafish all
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Genomic context

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See chst3a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571404.1 (32245776..32268465, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018360776.1 (932..19765)

NW_026571404.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 2 Neighboring gene paired box 2a Neighboring gene cadherin-related family member 1a Neighboring gene leucine-rich repeat, immunoglobulin-like and transmembrane domains 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3a
Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571404.1 Reference ASM2622593v1 Primary Assembly

    Range
    32245776..32268465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020939653.2 → XP_020795312.1  carbohydrate sulfotransferase 3a

    Conserved Domains (1) summary
    cl21551
    Location:222 → 406
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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