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pigv phosphatidylinositol glycan anchor biosynthesis, class V [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110171760, updated on 15-Mar-2024

Summary

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Gene symbol
pigv
Gene description
phosphatidylinositol glycan anchor biosynthesis, class V
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571447.1 (24169640..24172243)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018359358.1 (8642883..8645303)

NW_026571447.1Genomic Context describing neighboring genes Neighboring gene GPN-loop GTPase 2 Neighboring gene AT-rich interaction domain 1Aa Neighboring gene zinc finger DHHC-type palmitoyltransferase 18a Neighboring gene terminal nucleotidyltransferase 5ba

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC18-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571447.1 Reference ASM2622593v1 Primary Assembly

    Range
    24169640..24172243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020937536.2 → XP_020793195.1  palmitoyltransferase ZDHHC18-A

    Conserved Domains (1) summary
    cl21590
    Location:6 → 507
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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