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b3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110169507, updated on 15-Mar-2024

Summary

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Gene symbol
b3gnt9
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Locus tag
NL108_008504
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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See b3gnt9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571152.1 (27076313..27083520, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018358326.1 (7914229..7919312, complement)

NW_026571152.1Genomic Context describing neighboring genes Neighboring gene core-binding factor subunit beta Neighboring gene phagosome assembly factor 1 Neighboring gene Bardet-Biedl syndrome 2 Neighboring gene SET domain containing 6, protein lysine methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571152.1 Reference ASM2622593v1 Primary Assembly

    Range
    27076313..27083520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055155245.1 → XP_055011220.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

  2. XM_055155244.1 → XP_055011219.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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