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mgat1b alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110163468, updated on 15-Mar-2024

Summary

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Gene symbol
mgat1b
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
Locus tag
NL108_011176
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
zebrafish all
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Genomic context

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See mgat1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571175.1 (34241300..34296571, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018355681.1 (456665..493844)

NW_026571175.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIH, polypeptide 4 Neighboring gene RNA polymerase I subunit H Neighboring gene valyl-tRNA synthetase 2, mitochondrial Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571175.1 Reference ASM2622593v1 Primary Assembly

    Range
    34241300..34296571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055157447.1 → XP_055013422.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

  2. XM_055157448.1 → XP_055013423.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

Nucleotide Protein
Heading Accession and Version

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