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galnt9 polypeptide N-acetylgalactosaminyltransferase 9 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110163422, updated on 15-Mar-2024

Summary

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Gene symbol
galnt9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Locus tag
NL108_009848
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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See galnt9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571353.1 (14096606..14246793)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018355647.1 (898407..1016304, complement)

NW_026571353.1Genomic Context describing neighboring genes Neighboring gene checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase Neighboring gene fibrosin-like 1 Neighboring gene ATPase family AAA domain containing 1a Neighboring gene 5-hydroxytryptamine (serotonin) receptor 7c

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571353.1 Reference ASM2622593v1 Primary Assembly

    Range
    14096606..14246793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055162134.1 → XP_055018109.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

  2. XM_055162133.1 → XP_055018108.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

  3. XM_020928377.2 → XP_020784036.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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