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gyg2 glycogenin 2 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110161075, updated on 12-Sep-2024

Summary

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Gene symbol
gyg2
Gene description
glycogenin 2
Locus tag
NL108_012108
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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See gyg2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026570994.1 (19405019..19424212, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018354896.1 (72428..91569, complement)

NW_026570994.1Genomic Context describing neighboring genes Neighboring gene protein kinase X-linked Neighboring gene matrix-remodelling associated 5a Neighboring gene CD99 molecule Neighboring gene E3 SUMO-protein ligase ZBED1-like Neighboring gene dehydrogenase/reductase (SDR family) X-linked

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026570994.1 Reference ASM2622593v1 Primary Assembly

    Range
    19405019..19424212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055147669.1 → XP_055003644.1  glycogenin-2

Nucleotide Protein
Heading Accession and Version

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