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LOC110156338 exostosin-1 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110156338, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110156338
Gene description
exostosin-1
Locus tag
NL108_013507
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
zebrafish all
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Genomic context

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See LOC110156338 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571036.1 (15256781..15438720)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018345858.1 (12784670..12968626, complement)

NW_026571036.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor class A, member 5 (putative) Neighboring gene sterile alpha motif domain-containing protein 12-like Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC129407713 Neighboring gene uncharacterized LOC129407714 Neighboring gene tripartite motif-containing protein 67 Neighboring gene chromosome unknown C1orf131 homolog Neighboring gene glyceronephosphate O-acyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571036.1 Reference ASM2622593v1 Primary Assembly

    Range
    15256781..15438720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020920549.2 → XP_020776208.1  exostosin-1 isoform X1

    Conserved Domains (2) summary
    pfam03016
    Location:150 → 436
    Exostosin; Exostosin family
    pfam09258
    Location:520 → 765
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_055149686.1 → XP_055005661.1  exostosin-1 isoform X2

  3. XM_055149687.1 → XP_055005662.1  exostosin-1 isoform X3

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases