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b3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110156246, updated on 15-Mar-2024

Summary

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Gene symbol
b3gat3
Gene description
beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
Locus tag
NL108_013819
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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See b3gat3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571153.1 (33407532..33419260)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018353872.1 (436843..444243, complement)

NW_026571153.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene N-alpha-acetyltransferase 40, NatD catalytic subunit Neighboring gene uncharacterized LOC110156256 Neighboring gene small nucleolar RNA SNORD29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571153.1 Reference ASM2622593v1 Primary Assembly

    Range
    33407532..33419260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055156375.1 → XP_055012350.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X1

  2. XM_055156376.1 → XP_055012351.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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