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alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110154480, updated on 15-Mar-2024

Summary

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Gene symbol
alg1
Gene description
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase
Locus tag
NL108_014625
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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See alg1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571115.1 (5319780..5334976)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018351516.1 (953063..968577)

NW_026571115.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 70 Neighboring gene chromosome unknown C16orf89 homolog Neighboring gene 5S ribosomal RNA Neighboring gene eukaryotic elongation factor 2 lysine methyltransferase Neighboring gene THAP domain-containing protein 2-like Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class Q

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571115.1 Reference ASM2622593v1 Primary Assembly

    Range
    5319780..5334976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020918473.2 → XP_020774132.2  chitobiosyldiphosphodolichol beta-mannosyltransferase

Nucleotide Protein
Heading Accession and Version

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