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LOC110116478 mitochondrial carnitine/acylcarnitine carrier-like protein [ Dendrobium catenatum ]

Gene ID: 110116478, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110116478
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
MA16_Dca003890
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Also known as
BOU
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Genomic context

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See LOC110116478 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021318852.1 (3123618..3128052, complement)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018317429.1 (245755..250211, complement)

NW_021318852.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH96 Neighboring gene uncharacterized LOC110116480 Neighboring gene uncharacterized LOC110116484 Neighboring gene bifunctional pinoresinol-lariciresinol reductase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021318852.1 Reference ASM160598v2 Primary Assembly

    Range
    3123618..3128052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020850044.2 → XP_020705703.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A2I0X1T8
    Conserved Domains (1) summary
    pfam00153
    Location:101 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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