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LOC110114142 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [ Dendrobium catenatum ]

Gene ID: 110114142, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110114142
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Locus tag
MA16_Dca000169
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Also known as
SPY
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021319083.1 (5440706..5520423, complement)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018310808.1 (4154..85688)

NW_021319083.1Genomic Context describing neighboring genes Neighboring gene transcription repressor OFP13-like Neighboring gene OTU domain-containing protein 5-B Neighboring gene NAC domain-containing protein 90 Neighboring gene ubiquitin-60S ribosomal protein L40 Neighboring gene small nucleolar RNA Z266

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Names
putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021319083.1 Reference ASM160598v2 Primary Assembly

    Range
    5440706..5520423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020846913.2 → XP_020702572.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

    UniProtKB/TrEMBL
    A0A2I0WT45
    Conserved Domains (3) summary
    COG0457
    Location:180 → 460
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG3914
    Location:321 → 852
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:337 → 365
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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