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LOC110112460 callose synthase 12 [ Dendrobium catenatum ]

Gene ID: 110112460, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110112460
Gene description
callose synthase 12
Locus tag
MA16_Dca000364
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Also known as
CALS12
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021319083.1 (12340231..12367628)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018306205.1 (115572..143018)

NW_021319083.1Genomic Context describing neighboring genes Neighboring gene probable helicase with zinc finger domain Neighboring gene 5S ribosomal RNA Neighboring gene probable helicase with zinc finger domain Neighboring gene small nucleolar RNA J33 Neighboring gene UV-B-induced protein At3g17800, chloroplastic-like Neighboring gene U-box domain-containing protein 21-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021319083.1 Reference ASM160598v2 Primary Assembly

    Range
    12340231..12367628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020844696.2 → XP_020700355.1  callose synthase 12

    UniProtKB/TrEMBL
    A0A2I0WTN2
    Conserved Domains (2) summary
    pfam02364
    Location:887 → 1656
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:172 → 285
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_020844693.2 → XP_020700352.1  callose synthase 12

    UniProtKB/TrEMBL
    A0A2I0WTN2
    Conserved Domains (2) summary
    pfam02364
    Location:887 → 1656
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:172 → 285
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  3. XM_028695156.1 → XP_028550989.1  callose synthase 12

    UniProtKB/TrEMBL
    A0A2I0WTN2
    Conserved Domains (2) summary
    pfam02364
    Location:887 → 1656
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:172 → 285
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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