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LOC110099871 arabinosyltransferase RRA3 [ Dendrobium catenatum ]

Gene ID: 110099871, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110099871
Gene description
arabinosyltransferase RRA3
Locus tag
MA16_Dca022861
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Genomic context

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See LOC110099871 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021318899.1 (415151..427057)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018274772.1 (360447..372292)

NW_021318899.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 71A9 Neighboring gene translation initiation factor eIF-2B subunit epsilon Neighboring gene probable F-box protein At5g04010 Neighboring gene tip elongation aberrant protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA3
Names
rhamnogalacturonan II specific xylosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021318899.1 Reference ASM160598v2 Primary Assembly

    Range
    415151..427057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020827174.2 → XP_020682833.1  arabinosyltransferase RRA3

    UniProtKB/TrEMBL
    A0A2I0X0B6
    Conserved Domains (2) summary
    pfam03407
    Location:188 → 411
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
    pfam04156
    Location:23 → 120
    IncA; IncA protein
Nucleotide Protein
Heading Accession and Version

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