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LOC110098158 mediator of RNA polymerase II transcription subunit 23 [ Dendrobium catenatum ]

Gene ID: 110098158, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110098158
Gene description
mediator of RNA polymerase II transcription subunit 23
Locus tag
MA16_Dca024966
Gene type
protein coding
RefSeq status
MODEL
Organism
Dendrobium catenatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Also known as
MED23
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC110098158 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM160598v2 (GCF_001605985.2) Unplaced Scaffold NW_021319700.1 (235647..306643, complement)
100 previous assembly ASM160598v1 (GCF_001605985.1) Unplaced Scaffold NW_018270403.1 (96153..171210, complement)

NW_021319700.1Genomic Context describing neighboring genes Neighboring gene HMG-Y-related protein A Neighboring gene ADP-ribosylation factor-like protein 8c Neighboring gene transfer RNA aspartic acid (anticodon GUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dendrobium catenatum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM160598v2 Primary Assembly

Genomic

  1. NW_021319700.1 Reference ASM160598v2 Primary Assembly

    Range
    235647..306643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020824891.1 → XP_020680550.1  mediator of RNA polymerase II transcription subunit 23

    Conserved Domains (1) summary
    pfam11573
    Location:679 → 1264
    Med23; Mediator complex subunit 23
Nucleotide Protein
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